STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UK21Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (543 aa)    
Predicted Functional Partners:
A0A1X7ULI0
Amine oxidase.
    
 0.965
A0A1X7VRR0
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.956
A0A1X7V554
C2H2-type domain-containing protein.
  
 0.941
A0A1X7VER4
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.941
A0A1X7VFH5
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.941
A0A1X7VEH7
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.940
A0A1X7UZJ4
Acetyl-coenzyme A synthetase.
  
 
 0.939
A0A1X7V5H0
Acetyl-coenzyme A synthetase.
  
 
 0.939
A0A1X7SW61
Uncharacterized protein.
  
 0.934
A0A1X7TVU1
Uncharacterized protein.
  
 0.934
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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