STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UMP0HD_domain domain-containing protein. (137 aa)    
Predicted Functional Partners:
A0A1X7SD64
Uncharacterized protein.
    
  0.676
A0A1X7VKG4
AMPK1_CBM domain-containing protein.
    
  0.676
A0A1X7VQN9
Uncharacterized protein.
    
  0.676
A0A1X7TYI8
Uncharacterized protein; Belongs to the HAD-like hydrolase superfamily.
  
  
 0.646
A0A1X7TED2
Uncharacterized protein.
   
    0.638
A0A1X7TTA6
Uncharacterized protein.
   
 
  0.609
A0A1X7UNL1
DUF1768 domain-containing protein.
   
 
  0.609
A0A1X7UWN7
CMP/dCMP-type deaminase domain-containing protein.
   
 
  0.609
A0A1X7VN10
CMP/dCMP-type deaminase domain-containing protein.
   
 
  0.609
A0A1X7SSD8
PNP_UDP_1 domain-containing protein.
  
 
  0.564
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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