STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UNB7EFG_C domain-containing protein. (519 aa)    
Predicted Functional Partners:
A0A1X7UNC2
Uncharacterized protein.
  
  
 
0.901
A0A1X7SV59
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.841
A0A1X7VEE0
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.841
A0A1X7V2Q5
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 0.766
A0A1X7V8E5
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
  
 0.766
A0A1X7VSI6
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 0.766
A0A1X7VVL0
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.766
A0A1X7UMC8
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.764
A0A1X7V6E2
Ribosomal_L2_C domain-containing protein.
  
 0.764
A0A1X7VDU7
Uncharacterized protein.
  
 
 0.756
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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