STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UNP6Malate dehydrogenase. (332 aa)    
Predicted Functional Partners:
A0A1X7V0U2
Citrate synthase; Belongs to the citrate synthase family.
  
 0.994
A0A1X7VGA0
Uncharacterized protein.
  
 0.989
A0A1X7V0V2
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
  
 0.976
A0A1X7UQ18
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
   
 0.975
A0A1X7TDJ6
Aspartate aminotransferase.
   
 0.964
A0A1X7TDW1
Uncharacterized protein.
   
 0.964
A0A1X7TI67
Aspartate aminotransferase.
   
 0.956
A0A1X7UCW8
Uncharacterized protein.
  
 
 0.956
A0A1X7UF25
Aminotran_1_2 domain-containing protein.
   
 0.956
A0A1X7VFN8
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.907
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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