STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UPF6Uncharacterized protein. (364 aa)    
Predicted Functional Partners:
A0A1X7V9A4
Serine/threonine-protein phosphatase.
   
 0.998
A0A1X7VDF9
SMK-1 domain-containing protein.
   
 
 0.993
A0A1X7VCL9
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
 
 0.917
A0A1X7VJR0
Transcription elongation factor SPT5.
    
 
 0.846
A0A1X7VVU3
Serine/threonine-protein phosphatase.
    
 0.843
A0A1X7VKW0
Serine/threonine-protein phosphatase.
    
 0.826
A0A1X7VNQ7
SER_THR_PHOSPHATASE domain-containing protein.
    
 0.826
A0A1X7VIY8
Metallophos domain-containing protein.
    
 0.807
A0A1X7U0C1
Serine/threonine-protein phosphatase.
    
 0.775
A0A1X7V2W0
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.775
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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