STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UQR6Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
A0A1X7V167
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.997
A0A1X7VNX4
Uncharacterized protein.
   
 
 0.995
A0A1X7UNZ0
Uncharacterized protein.
   
 
 0.993
A0A1X7UZY9
Uncharacterized protein.
   
 
 0.992
A0A1X7VAL6
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.992
A0A1X7UUM1
Uncharacterized protein.
   
 
 0.991
A0A1X7VF42
Uncharacterized protein.
   
 
 0.991
A0A1X7VQ26
Uncharacterized protein.
   
 
 0.991
A0A1X7ULL1
Uncharacterized protein.
   
 
 0.990
A0A1X7V7I7
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.989
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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