STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7USA1Dynein light chain. (114 aa)    
Predicted Functional Partners:
A0A1X7UZ29
Uncharacterized protein.
   
 
 0.923
A0A1X7VG22
Dynein light chain roadblock.
   
 0.913
A0A1X7V4Z0
Robl_LC7 domain-containing protein.
   
 0.891
A0A1X7VW18
Uncharacterized protein; Belongs to the NDK family.
   
 
 0.850
A0A1X7VR84
Uncharacterized protein.
    
 
 0.793
A0A1X7U6T1
Uncharacterized protein.
    
 0.789
A0A1X7TSM4
WD_REPEATS_REGION domain-containing protein.
    
 0.773
A0A1X7UIF6
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.732
A0A1X7VL13
Uncharacterized protein.
    
 
 0.732
A0A1X7VNV1
Uncharacterized protein.
    
 0.724
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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