STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UTY8Uncharacterized protein. (215 aa)    
Predicted Functional Partners:
A0A1X7V0W8
Uncharacterized protein.
    
 
 0.917
A0A1X7UN15
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
 
 0.912
A0A1X7VUN0
Plug_translocon domain-containing protein.
   
 
 0.872
A0A1X7SX56
Peptidase_M28 domain-containing protein.
    
 
 0.855
A0A1X7U872
Peptidase_M28 domain-containing protein.
    
 
 0.855
A0A1X7USD6
CRC domain-containing protein.
   
 0.843
A0A1X7V524
Uncharacterized protein.
   
 0.821
A0A1X7VRY9
DIRP domain-containing protein.
    
 0.812
A0A1X7VSI6
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.812
A0A1X7UZY3
WD_REPEATS_REGION domain-containing protein.
   
 0.806
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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