STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UVI0PseudoU_synth_2 domain-containing protein. (268 aa)    
Predicted Functional Partners:
A0A1X7V8Q5
Uncharacterized protein.
  
 
 0.797
A0A1X7V7Q2
TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 
 0.776
A0A1X7UNZ0
Uncharacterized protein.
  
   0.739
A0A1X7V167
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.739
A0A1X7V7K6
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.726
A0A1X7VCF1
TRUD domain-containing protein.
    
 
 0.713
A0A1X7U7D7
TRUD domain-containing protein.
    
 
 0.698
A0A1X7VF42
Uncharacterized protein.
  
   0.683
A0A1X7UP07
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.680
A0A1X7UQR6
Uncharacterized protein.
    
 
 0.671
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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