STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UVT3Pept_C1 domain-containing protein. (64 aa)    
Predicted Functional Partners:
A0A1X7V5A4
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.469
A0A1X7V816
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.469
A0A1X7UXB9
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.438
A0A1X7U127
Uncharacterized protein.
   
 
 0.426
A0A1X7VUI3
L-type lectin-like domain-containing protein.
     
 0.422
A0A1X7V9A9
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.415
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.