STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UZA4ABC transporter domain-containing protein. (439 aa)    
Predicted Functional Partners:
A0A1X7UYS1
Uncharacterized protein.
    
 0.803
A0A1X7UWV6
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
    
 
 0.738
A0A1X7VHK0
Uncharacterized protein.
   
 0.729
A0A1X7VRY2
Uncharacterized protein.
  
0.695
A0A1X7V2C0
SH3 domain-containing protein.
   
 
 0.671
A0A1X7V7K5
Pex14_N domain-containing protein.
   
 0.653
A0A1X7UFA3
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.646
A0A1X7UVJ4
Uncharacterized protein.
   
 
 0.616
A0A1X7U2E7
Uncharacterized protein.
   
 
 0.604
A0A1X7UDX5
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
     
 0.576
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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