STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7UZP8Uncharacterized protein. (998 aa)    
Predicted Functional Partners:
A0A1X7VBY6
Uncharacterized protein.
    
 
0.978
A0A1X7TKR9
Uncharacterized protein.
    
 0.641
A0A1X7UHQ3
Uncharacterized protein.
    
 0.641
A0A1X7UP97
Uncharacterized protein.
    
 0.641
A0A1X7UPN2
Uncharacterized protein.
    
 0.641
A0A1X7UU13
Uncharacterized protein.
    
 0.641
A0A1X7UV58
Uncharacterized protein.
    
 0.641
A0A1X7VED2
Uncharacterized protein.
    
 0.641
A0A1X7VN32
Uncharacterized protein.
    
 0.641
A0A1X7VN91
Uncharacterized protein.
    
 0.641
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.