STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7V067Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (357 aa)    
Predicted Functional Partners:
A0A1X7V4X9
Nudix hydrolase domain-containing protein.
  
 
 0.986
A0A1X7VM40
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.985
A0A1X7V8G4
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
 0.972
A0A1X7UWN4
Uncharacterized protein.
  
 0.958
A0A1X7TME7
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
 0.956
A0A1X7VI13
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
 0.955
A0A1X7VKV9
Sulfatase domain-containing protein.
     
 0.941
A0A1X7TNM4
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.939
A0A1X7SK40
Uncharacterized protein.
  
 
 0.935
A0A1X7UZE4
Uncharacterized protein.
  
 
 0.935
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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