STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7V5C8Uncharacterized protein. (173 aa)    
Predicted Functional Partners:
A0A1X7V930
Uncharacterized protein.
   
 0.877
A0A1X7U972
Uncharacterized protein.
    
 
 0.836
A0A1X7UHN4
Uncharacterized protein.
   
 0.755
A0A1X7TXM2
Uncharacterized protein.
    
 
 0.661
A0A1X7VC73
Uncharacterized protein.
    
 
 0.632
A0A1X7SMW1
Uncharacterized protein.
    
 
 0.592
A0A1X7UB71
Uncharacterized protein.
    
 
 0.592
A0A1X7VHP8
Uncharacterized protein.
      
 0.555
A0A1X7VAY1
Uncharacterized protein.
      
 0.537
A0A1X7VMU6
Longin domain-containing protein; Belongs to the synaptobrevin family.
      
 0.526
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.