STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7V903Uncharacterized protein. (221 aa)    
Predicted Functional Partners:
A0A1X7SM10
Uncharacterized protein.
    
 0.918
A0A1X7UQL7
Protein kinase domain-containing protein.
    
 0.918
A0A1X7UQX0
Protein kinase domain-containing protein.
    
 0.918
A0A1X7URC1
Uncharacterized protein.
    
 0.918
A0A1X7URP0
Uncharacterized protein.
    
 0.918
A0A1X7V2U1
Uncharacterized protein.
    
 0.918
A0A1X7TMD9
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.609
A0A1X7VR90
PX domain-containing protein.
   
 0.609
A0A1X7VLD8
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.591
A0A1X7TXX6
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.587
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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