STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VBQ0TPR_REGION domain-containing protein. (294 aa)    
Predicted Functional Partners:
A0A1X7V0W6
Uncharacterized protein.
   
 0.953
A0A1X7V7E7
EMC1_C domain-containing protein.
   
 0.952
A0A1X7V4V3
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.936
A0A1X7UPP6
Uncharacterized protein.
    
 
 0.921
A0A1X7V4I3
DUF2012 domain-containing protein.
   
 
 0.917
A0A1X7SUV5
MPN domain-containing protein.
   
 0.870
A0A1X7TT47
MPN domain-containing protein.
   
 0.870
A0A1X7SMW5
Uncharacterized protein.
   
 
 0.858
A0A1X7V4X4
ER membrane protein complex subunit 3.
   
 
 0.858
A0A1X7UAI6
Uncharacterized protein.
    
 
 0.823
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.