STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VCS4Uncharacterized protein. (315 aa)    
Predicted Functional Partners:
A0A1X7V8E1
GMP_PDE_delta domain-containing protein.
    
 
 0.617
A0A1X7U4A4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.566
A0A1X7V3U9
C2 NT-type domain-containing protein.
      
 0.555
A0A1X7UH93
Uncharacterized protein.
      
 0.546
A0A1X7U3K7
Nucleoside diphosphate kinase.
    
 
 0.522
A0A1X7UEE1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.467
A0A1X7V3J4
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.467
A0A1X7U621
Uncharacterized protein.
      
 0.447
A0A1X7UP01
Uncharacterized protein.
    
 0.431
A0A1X7U0B6
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.415
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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