STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VEG0CID domain-containing protein. (330 aa)    
Predicted Functional Partners:
A0A1X7UZF6
Uncharacterized protein.
   
 
 0.924
A0A1X7VSW6
RAI1 domain-containing protein.
    
 
 0.920
A0A1X7TB04
Uncharacterized protein.
    
 0.902
A0A1X7VVZ9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.902
A0A1X7SG98
RNA_pol_Rpb2_7 domain-containing protein.
   
 0.880
A0A1X7TV79
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.880
A0A1X7U312
CID domain-containing protein.
  
 
0.814
A0A1X7VEI4
RPOLD domain-containing protein.
    
 0.809
A0A1X7TW91
Uncharacterized protein.
    
 0.801
A0A1X7URM2
RPOL4c domain-containing protein.
    
  0.787
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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