STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VGM9Uncharacterized protein. (240 aa)    
Predicted Functional Partners:
A0A1X7UQU5
Structural maintenance of chromosomes protein.
   
    0.530
A0A1X7U253
Uncharacterized protein.
   
    0.528
A0A1X7U198
WD_REPEATS_REGION domain-containing protein.
   
    0.526
A0A1X7VGR6
WD_REPEATS_REGION domain-containing protein.
   
    0.526
A0A1X7VU33
26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.
   
    0.526
A0A1X7UMT2
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 
  0.480
A0A1X7VLP7
Uncharacterized protein.
   
 
  0.473
A0A1X7U7Q8
Uncharacterized protein.
   
    0.453
A0A1X7VDS0
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.453
A0A1X7VL92
NOP5NT domain-containing protein.
   
    0.443
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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