STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VIP1Uncharacterized protein. (246 aa)    
Predicted Functional Partners:
A0A1X7VS80
Uridine kinase; Belongs to the uridine kinase family.
 
0.997
A0A1X7U0B7
Uridine kinase; Belongs to the uridine kinase family.
  
 0.992
A0A1X7ULD7
OMPdecase domain-containing protein.
    
 0.967
A0A1X7UH51
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
  
 0.962
A0A1X7U0G6
PNP_UDP_1 domain-containing protein.
     
 0.956
A0A1X7U129
PNP_UDP_1 domain-containing protein.
     
 0.956
A0A1X7U2E0
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
  
 
 0.953
A0A1X7V415
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
   
 
 0.941
A0A1X7SSD8
PNP_UDP_1 domain-containing protein.
  
 
 0.932
A0A1X7STR5
PNP_UDP_1 domain-containing protein.
  
 
 0.932
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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