STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VKF1DDE_Tnp_IS1595 domain-containing protein. (177 aa)    
Predicted Functional Partners:
A0A1X7UB38
Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.810
A0A1X7V053
DNA_mis_repair domain-containing protein.
    
 0.807
A0A1X7U1M9
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.747
A0A1X7V197
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.747
A0A1X7VKX8
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.685
A0A1X7T169
MUTSd domain-containing protein.
  
 0.648
A0A1X7UDR7
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.648
A0A1X7VGB3
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.619
A0A1X7VGZ0
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.619
A0A1X7VH91
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.619
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.