STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VKW4Uncharacterized protein. (549 aa)    
Predicted Functional Partners:
A0A1X7VXQ0
Uncharacterized protein.
    
 0.602
A0A1X7UZB8
Uncharacterized protein.
    
 0.457
A0A1X7UY68
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.456
A0A1X7UB52
Uncharacterized protein.
    
 0.451
A0A1X7VW18
Uncharacterized protein; Belongs to the NDK family.
    
 0.442
A0A1X7VVC9
Uncharacterized protein.
   
 
 0.433
A0A1X7VXZ0
Uncharacterized protein.
   
 
 0.433
A0A1X7VHD8
Uncharacterized protein.
   
 
 0.430
A0A1X7VMK5
Uncharacterized protein.
    
 0.405
A0A1X7VLI5
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.402
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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