STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VLB7Uncharacterized protein. (251 aa)    
Predicted Functional Partners:
A0A1X7UMG8
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.590
A0A1X7UHN5
Uncharacterized protein.
  
  
  0.550
A0A1X7VPF8
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
    
 0.549
A0A1X7SHT9
Uncharacterized protein.
  
  
  0.545
A0A1X7TMW7
Uncharacterized protein.
  
  
  0.534
A0A1X7TET6
Uncharacterized protein.
     
 0.525
A0A1X7TAI4
Uncharacterized protein.
  
  
  0.521
A0A1X7UJU6
Uncharacterized protein.
     
 0.520
A0A1X7VTL2
Uncharacterized protein.
     
 0.515
A0A1X7U3D5
Uncharacterized protein.
  
  
  0.484
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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