STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VMD8Uncharacterized protein. (353 aa)    
Predicted Functional Partners:
A0A1X7U8P9
GDT1 family protein.
      
 0.569
A0A1X7V014
Uncharacterized protein.
      
 0.557
A0A1X7U972
Uncharacterized protein.
    
 0.493
A0A1X7V930
Uncharacterized protein.
     
 0.474
A0A1X7UHJ7
Uncharacterized protein.
      
 0.443
A0A1X7SMW1
Uncharacterized protein.
     
 0.421
A0A1X7UB71
Uncharacterized protein.
     
 0.421
A0A1X7UJB7
Uncharacterized protein.
     
 0.417
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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