STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VQ82Uncharacterized protein. (138 aa)    
Predicted Functional Partners:
A0A1X7VAK9
Sep15_SelM domain-containing protein.
   
  
 0.693
A0A1X7VKB8
Uncharacterized protein.
      
 0.655
A0A1X7VU89
Tr-type G domain-containing protein.
   
  
 0.655
A0A1X7V707
MsrB domain-containing protein.
      
 0.574
A0A1X7UJP2
EF-hand domain-containing protein.
      
 0.561
A0A1X7V4B0
PMSR domain-containing protein.
      
 0.554
A0A1X7V1D3
Tr-type G domain-containing protein.
   
  
 0.521
A0A1X7UT77
Uncharacterized protein.
      
 0.516
A0A1X7V1U1
Uncharacterized protein.
   
  
 0.499
A0A1X7VLL0
Uncharacterized protein.
   
  
 0.499
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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