STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VRF4DAGKc domain-containing protein. (699 aa)    
Predicted Functional Partners:
A0A1X7TS80
Neutral ceramidase.
    
 0.954
A0A1X7TWQ8
TLC domain-containing protein.
     
 0.944
A0A1X7VTW6
TLC domain-containing protein.
     
 0.944
A0A1X7VNK5
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.942
A0A1X7UCV4
Lipid_DES domain-containing protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
    
 0.927
A0A1X7VXV0
Lipid_DES domain-containing protein.
    
 0.927
A0A1X7UXW7
Glucosylceramidase.
    
 0.914
A0A1X7T783
Metallophos domain-containing protein.
    
 0.912
A0A1X7UA88
Saposin B-type domain-containing protein.
    
 0.912
A0A1X7UB10
Saposin B-type domain-containing protein.
    
 0.912
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.