STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VUP8SAP130_C domain-containing protein. (768 aa)    
Predicted Functional Partners:
A0A1X7VCA7
ARID domain-containing protein.
    
 0.854
A0A1X7VPI2
Uncharacterized protein.
    
 0.813
A0A1X7VJY1
HDAC_interact domain-containing protein.
   
 0.772
A0A1X7VJ33
Uncharacterized protein.
   
 0.741
A0A1X7VNH1
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.567
A0A1X7UK09
Ion_trans domain-containing protein.
      
 0.560
A0A1X7VFV2
Snurportin1 domain-containing protein.
      
 0.559
A0A1X7VC81
Uncharacterized protein.
    
 0.533
A0A1X7UNF6
Transcriptional adapter.
     
 0.522
A0A1X7THQ9
Uncharacterized protein.
   
    0.507
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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