STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VV42Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family. (629 aa)    
Predicted Functional Partners:
A0A1X7TV02
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.918
A0A1X7VJ22
ENTH domain-containing protein.
    
 0.878
A0A1X7VDN2
Uncharacterized protein.
    
 
 0.870
A0A1X7SXM0
Uncharacterized protein.
    
 0.869
A0A1X7V9N0
Uncharacterized protein.
    
 0.869
A0A1X7U371
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.855
A0A1X7VJV4
AP complex subunit beta.
    
 0.816
A0A1X7VTZ6
Rho-GAP domain-containing protein.
    
   0.803
A0A1X7VJ52
Uncharacterized protein.
   
 0.743
A0A1X7SM10
Uncharacterized protein.
   
 0.694
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.