STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VWE4Uncharacterized protein. (114 aa)    
Predicted Functional Partners:
A0A1X7V7I5
Uncharacterized protein.
    
 0.522
A0A1X7T281
Uncharacterized protein.
    
 0.516
A0A1X7VLV8
ERCC4 domain-containing protein.
    
 0.471
A0A1X7U8Y8
Uncharacterized protein.
   
 
 0.456
A0A1X7UF89
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.418
A0A1X7VV84
Small nuclear ribonucleoprotein Sm D2.
    
 0.417
A0A1X7TRD1
Uncharacterized protein.
    
 0.411
A0A1X7TXK8
Uncharacterized protein.
    
 0.411
A0A1X7UH02
Uncharacterized protein.
    
 0.411
A0A1X7V6X1
Uncharacterized protein.
    
 0.411
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.