STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0Q70_19998AA_TRNA_LIGASE_II domain-containing protein. (720 aa)    
Predicted Functional Partners:
C0Q70_18477
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
     
 0.959
C0Q70_13887
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.894
C0Q70_10881
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.884
C0Q70_00835
Radical_SAM domain-containing protein.
   
 
 0.881
C0Q70_20652
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.869
C0Q70_13514
Tr-type G domain-containing protein.
  
 0.866
C0Q70_11751
Tyrosine--tRNA ligase.
  
 
 0.846
C0Q70_11750
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.846
C0Q70_18528
Uncharacterized protein.
   
 
 0.839
C0Q70_01938
Uncharacterized protein.
   
 
 0.837
Your Current Organism:
Pomacea canaliculata
NCBI taxonomy Id: 400727
Other names: P. canaliculata
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