STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0Q70_20132Uncharacterized protein. (553 aa)    
Predicted Functional Partners:
C0Q70_05037
Uncharacterized protein.
    
 
 0.931
C0Q70_18493
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.727
C0Q70_20411
PX domain-containing protein.
   
 
 0.667
C0Q70_14279
PX domain-containing protein.
    
 
 0.665
C0Q70_06785
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.665
C0Q70_10730
PX domain-containing protein.
    
 
 0.660
C0Q70_04310
Rab-GAP TBC domain-containing protein.
    
 
 0.580
C0Q70_07992
CAP-ZIP_m domain-containing protein.
    
 
 0.562
C0Q70_15208
Uncharacterized protein.
    
 
 0.540
C0Q70_11678
Diacylglycerol kinase.
    
 
 0.525
Your Current Organism:
Pomacea canaliculata
NCBI taxonomy Id: 400727
Other names: P. canaliculata
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