C0Q70_20132 protein (Pomacea canaliculata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

C0Q70_20132

Uncharacterized protein. (553 aa)

Predicted Functional Partners:

C0Q70_18493

0.986

C0Q70_06785

0.946

C0Q70_05037

0.941

C0Q70_07992

0.934

C0Q70_20411

0.926

C0Q70_14279

0.926

C0Q70_04310

0.922

C0Q70_10730

0.843

C0Q70_15208

0.826

C0Q70_19168

0.796

Your Current Organism:

Pomacea canaliculata

NCBI taxonomy Id: 400727
Other names: P. canaliculata

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C0Q70_04310	C0Q70_06785	A0A2T7PV67	A0A2T7PD77	Rab-GAP TBC domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.981
C0Q70_04310	C0Q70_07992	A0A2T7PV67	A0A2T7PGJ9	Rab-GAP TBC domain-containing protein.	CAP-ZIP_m domain-containing protein.	0.570
C0Q70_04310	C0Q70_10730	A0A2T7PV67	A0A2T7P3Y9	Rab-GAP TBC domain-containing protein.	PX domain-containing protein.	0.777
C0Q70_04310	C0Q70_14279	A0A2T7PV67	A0A2T7NZK0	Rab-GAP TBC domain-containing protein.	PX domain-containing protein.	0.764
C0Q70_04310	C0Q70_18493	A0A2T7PV67	A0A2T7NGP1	Rab-GAP TBC domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.980
C0Q70_04310	C0Q70_20132	A0A2T7PV67	A0A2T7NET5	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.922
C0Q70_04310	C0Q70_20411	A0A2T7PV67	A0A2T7NFF9	Rab-GAP TBC domain-containing protein.	PX domain-containing protein.	0.752
C0Q70_05037	C0Q70_20132	A0A2T7PK67	A0A2T7NET5	Uncharacterized protein.	Uncharacterized protein.	0.941
C0Q70_06785	C0Q70_04310	A0A2T7PD77	A0A2T7PV67	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Rab-GAP TBC domain-containing protein.	0.981
C0Q70_06785	C0Q70_07992	A0A2T7PD77	A0A2T7PGJ9	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	CAP-ZIP_m domain-containing protein.	0.964
C0Q70_06785	C0Q70_10730	A0A2T7PD77	A0A2T7P3Y9	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	PX domain-containing protein.	0.989
C0Q70_06785	C0Q70_14279	A0A2T7PD77	A0A2T7NZK0	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	PX domain-containing protein.	0.937
C0Q70_06785	C0Q70_15208	A0A2T7PD77	A0A2T7NU87	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Uncharacterized protein.	0.603
C0Q70_06785	C0Q70_18493	A0A2T7PD77	A0A2T7NGP1	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.998
C0Q70_06785	C0Q70_20132	A0A2T7PD77	A0A2T7NET5	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	Uncharacterized protein.	0.946
C0Q70_06785	C0Q70_20411	A0A2T7PD77	A0A2T7NFF9	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	PX domain-containing protein.	0.978
C0Q70_07992	C0Q70_04310	A0A2T7PGJ9	A0A2T7PV67	CAP-ZIP_m domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.570
C0Q70_07992	C0Q70_06785	A0A2T7PGJ9	A0A2T7PD77	CAP-ZIP_m domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.964
C0Q70_07992	C0Q70_10730	A0A2T7PGJ9	A0A2T7P3Y9	CAP-ZIP_m domain-containing protein.	PX domain-containing protein.	0.515
C0Q70_07992	C0Q70_14279	A0A2T7PGJ9	A0A2T7NZK0	CAP-ZIP_m domain-containing protein.	PX domain-containing protein.	0.499