STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0Q70_18536Lysine--tRNA ligase. (975 aa)    
Predicted Functional Partners:
C0Q70_13211
Uncharacterized protein.
  
 0.999
C0Q70_04247
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.997
C0Q70_01783
Thioredoxin_16 domain-containing protein.
   
 0.975
C0Q70_20011
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
  
 0.967
C0Q70_01298
RF_PROK_I domain-containing protein.
  
 
 0.967
C0Q70_15430
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.959
C0Q70_19026
Uncharacterized protein.
   
 0.958
C0Q70_18323
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.958
C0Q70_15715
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.953
C0Q70_15283
ATP synthase subunit gamma.
  
  
 0.947
Your Current Organism:
Pomacea canaliculata
NCBI taxonomy Id: 400727
Other names: P. canaliculata
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.