STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0Q70_18242Uncharacterized protein. (2178 aa)    
Predicted Functional Partners:
C0Q70_00348
Uncharacterized protein.
    
 0.887
C0Q70_08432
FYVE-type domain-containing protein.
   
 0.867
C0Q70_03456
Uncharacterized protein.
    
 0.808
C0Q70_00246
VPS9 domain-containing protein.
    
 0.696
C0Q70_11257
Uncharacterized protein.
   
 0.663
C0Q70_06785
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.628
C0Q70_18673
Uncharacterized protein.
    
 0.623
C0Q70_09877
Uncharacterized protein.
    
 0.595
C0Q70_07617
Uncharacterized protein.
    
 0.595
C0Q70_00349
Uncharacterized protein.
    
 0.595
Your Current Organism:
Pomacea canaliculata
NCBI taxonomy Id: 400727
Other names: P. canaliculata
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