STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0Q70_16610RTR1-type domain-containing protein. (520 aa)    
Predicted Functional Partners:
C0Q70_18351
Uncharacterized protein.
   
    0.999
C0Q70_03276
Uncharacterized protein.
   
    0.999
C0Q70_13669
S1 domain-containing protein.
    
 0.980
C0Q70_02426
RPOL4c domain-containing protein.
    
 0.978
C0Q70_21000
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.977
C0Q70_15944
Uncharacterized protein.
    
 0.975
C0Q70_10338
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.972
C0Q70_18747
RPOLD domain-containing protein.
    
 0.970
C0Q70_12894
Uncharacterized protein.
    
 0.965
C0Q70_06942
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
    
 
 0.956
Your Current Organism:
Pomacea canaliculata
NCBI taxonomy Id: 400727
Other names: P. canaliculata
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