STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0Q70_15261Histone_H2A_C domain-containing protein. (79 aa)    
Predicted Functional Partners:
C0Q70_16271
Uncharacterized protein.
    
 0.988
C0Q70_13947
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.907
C0Q70_13946
Histone H2B; Belongs to the histone H2B family.
  
 0.872
C0Q70_14225
Histone H2B; Belongs to the histone H2B family.
  
 0.872
C0Q70_21628
Uncharacterized protein.
    
 0.845
C0Q70_10147
Histone domain-containing protein; Belongs to the histone H2B family.
  
 0.828
C0Q70_16807
Uncharacterized protein.
   
 0.772
C0Q70_06419
Uncharacterized protein.
    
   0.748
C0Q70_01497
Histone H2A; Belongs to the histone H2A family.
   
 0.740
C0Q70_05841
Uncharacterized protein.
   
 0.726
Your Current Organism:
Pomacea canaliculata
NCBI taxonomy Id: 400727
Other names: P. canaliculata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.