STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0Q70_08858SMC hinge domain-containing protein. (1143 aa)    
Predicted Functional Partners:
C0Q70_14771
Structural maintenance of chromosomes protein.
   
0.999
C0Q70_07298
Uncharacterized protein.
   
 0.999
C0Q70_21695
SCD domain-containing protein.
   
 0.998
C0Q70_02736
Nipped-B protein.
   
 0.997
C0Q70_05648
Uncharacterized protein.
   
 0.993
C0Q70_15939
Uncharacterized protein.
   
 0.991
C0Q70_10216
Rad21_Rec8_N domain-containing protein.
   
 0.965
C0Q70_01346
WAPL domain-containing protein.
   
 0.958
C0Q70_01797
Uncharacterized protein.
   
 0.935
C0Q70_03922
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
 0.901
Your Current Organism:
Pomacea canaliculata
NCBI taxonomy Id: 400727
Other names: P. canaliculata
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