STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0Q70_0764260S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (444 aa)    
Predicted Functional Partners:
C0Q70_02956
Peptidase_M24 domain-containing protein.
   
 
 0.995
C0Q70_04276
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
  
 
 0.994
C0Q70_15838
TRASH domain-containing protein.
   
 
 0.989
C0Q70_03885
Uncharacterized protein.
   
 
 0.989
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
   
 
 0.981
C0Q70_09862
Uncharacterized protein.
   
 
 0.979
C0Q70_14829
CP-type G domain-containing protein.
   
 
 0.976
C0Q70_00534
Ribosomal_L16 domain-containing protein.
    
 
 0.973
C0Q70_17332
CP-type G domain-containing protein.
   
 
 0.965
C0Q70_17638
Ribosomal_L18_c domain-containing protein.
   
 
 0.965
Your Current Organism:
Pomacea canaliculata
NCBI taxonomy Id: 400727
Other names: P. canaliculata
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.