STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0Q70_07887Integrase catalytic domain-containing protein. (165 aa)    
Predicted Functional Partners:
C0Q70_19247
Reverse transcriptase domain-containing protein.
 
     0.799
C0Q70_13936
Helicase ATP-binding domain-containing protein.
    
 0.655
C0Q70_07878
Reverse transcriptase domain-containing protein.
 
     0.652
C0Q70_05024
Reverse transcriptase domain-containing protein.
 
     0.635
C0Q70_21230
RT_RNaseH domain-containing protein.
 
     0.612
C0Q70_11275
Uncharacterized protein.
 
     0.568
C0Q70_18421
Uncharacterized protein.
 
     0.566
C0Q70_11461
RT_RNaseH_2 domain-containing protein.
 
     0.566
C0Q70_02531
Reverse transcriptase domain-containing protein.
 
     0.566
C0Q70_05025
Reverse transcriptase domain-containing protein.
 
     0.530
Your Current Organism:
Pomacea canaliculata
NCBI taxonomy Id: 400727
Other names: P. canaliculata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.