STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0Q70_00145HGTP_anticodon domain-containing protein. (415 aa)    
Predicted Functional Partners:
C0Q70_13211
Uncharacterized protein.
  
 
 0.980
C0Q70_11751
Tyrosine--tRNA ligase.
  
  
 0.956
C0Q70_11750
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.956
C0Q70_09908
DNApol_Exo domain-containing protein.
   
 
 0.918
C0Q70_09907
POLAc domain-containing protein.
   
 
 0.918
C0Q70_15839
AA_TRNA_LIGASE_II domain-containing protein.
   
  
 0.847
C0Q70_15430
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.844
C0Q70_06497
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.829
C0Q70_19026
Uncharacterized protein.
  
  
 0.824
C0Q70_18323
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.824
Your Current Organism:
Pomacea canaliculata
NCBI taxonomy Id: 400727
Other names: P. canaliculata
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