C0Q70_01266 protein (Pomacea canaliculata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C0Q70_01266

J domain-containing protein. (2167 aa)

Predicted Functional Partners:

C0Q70_18493

0.698

C0Q70_16888

0.691

C0Q70_16889

0.691

C0Q70_08842

0.691

C0Q70_20411

0.659

C0Q70_06785

0.610

C0Q70_04502

0.561

C0Q70_20385

0.524

C0Q70_06579

0.521

C0Q70_19468

0.501

Your Current Organism:

Pomacea canaliculata

NCBI taxonomy Id: 400727
Other names: P. canaliculata

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C0Q70_01266	C0Q70_04502	A0A2T7PZ08	A0A2T7PIN8	J domain-containing protein.	SAC domain-containing protein.	0.561
C0Q70_01266	C0Q70_06579	A0A2T7PZ08	A0A2T7PCL7	J domain-containing protein.	LsmAD domain-containing protein.	0.521
C0Q70_01266	C0Q70_06785	A0A2T7PZ08	A0A2T7PD77	J domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.610
C0Q70_01266	C0Q70_08842	A0A2T7PZ08	A0A2T7P843	J domain-containing protein.	Protein kinase domain-containing protein.	0.691
C0Q70_01266	C0Q70_16888	A0A2T7PZ08	A0A2T7NR12	J domain-containing protein.	Uncharacterized protein.	0.691
C0Q70_01266	C0Q70_16889	A0A2T7PZ08	A0A2T7NR29	J domain-containing protein.	J domain-containing protein.	0.691
C0Q70_01266	C0Q70_18493	A0A2T7PZ08	A0A2T7NGP1	J domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.698
C0Q70_01266	C0Q70_19468	A0A2T7PZ08	A0A2T7NJG9	J domain-containing protein.	Uncharacterized protein.	0.501
C0Q70_01266	C0Q70_20385	A0A2T7PZ08	A0A2T7NFF0	J domain-containing protein.	Glucosylceramidase.	0.524
C0Q70_01266	C0Q70_20411	A0A2T7PZ08	A0A2T7NFF9	J domain-containing protein.	PX domain-containing protein.	0.659
C0Q70_04502	C0Q70_01266	A0A2T7PIN8	A0A2T7PZ08	SAC domain-containing protein.	J domain-containing protein.	0.561
C0Q70_04502	C0Q70_06579	A0A2T7PIN8	A0A2T7PCL7	SAC domain-containing protein.	LsmAD domain-containing protein.	0.529
C0Q70_04502	C0Q70_08842	A0A2T7PIN8	A0A2T7P843	SAC domain-containing protein.	Protein kinase domain-containing protein.	0.660
C0Q70_04502	C0Q70_16888	A0A2T7PIN8	A0A2T7NR12	SAC domain-containing protein.	Uncharacterized protein.	0.660
C0Q70_04502	C0Q70_16889	A0A2T7PIN8	A0A2T7NR29	SAC domain-containing protein.	J domain-containing protein.	0.660
C0Q70_04502	C0Q70_18493	A0A2T7PIN8	A0A2T7NGP1	SAC domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.542
C0Q70_04502	C0Q70_20385	A0A2T7PIN8	A0A2T7NFF0	SAC domain-containing protein.	Glucosylceramidase.	0.511
C0Q70_06579	C0Q70_01266	A0A2T7PCL7	A0A2T7PZ08	LsmAD domain-containing protein.	J domain-containing protein.	0.521
C0Q70_06579	C0Q70_04502	A0A2T7PCL7	A0A2T7PIN8	LsmAD domain-containing protein.	SAC domain-containing protein.	0.529
C0Q70_06579	C0Q70_08842	A0A2T7PCL7	A0A2T7P843	LsmAD domain-containing protein.	Protein kinase domain-containing protein.	0.663