STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sugBTrehalose transport system permease protein SugB. (280 aa)    
Predicted Functional Partners:
KJL45681.1
Bacterial extracellular solute-binding protein.
 
 0.999
ugpC
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 0.999
KJL45420.1
Bacterial extracellular solute-binding protein.
 
 0.999
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 0.999
msmE_4
Multiple sugar-binding protein precursor.
  
 0.999
ycjO
Inner membrane ABC transporter permease protein YcjO.
 0.998
msmE_1
Multiple sugar-binding protein precursor.
 
 0.997
lacF_1
Lactose transport system permease protein LacF.
 
 0.970
lacF_3
Lactose transport system permease protein LacF.
 
  0.965
lacF_2
Lactose transport system permease protein LacF.
  0.943
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.