STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nanKN-acetylmannosamine kinase. (308 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.967
ppgK
Polyphosphate glucokinase.
  
  
 0.966
pgiB
Glucose-6-phosphate isomerase B.
    
 0.947
nagC_2
N-acetylglucosamine repressor.
 
  
  0.922
zwf_1
Glucose-6-phosphate 1-dehydrogenase.
    
 0.921
zwf_2
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
 0.921
pgm
Phosphoglucomutase.
     
 0.917
nagK
N-acetyl-D-glucosamine kinase.
  
  
 
0.916
fruA
PTS system fructose-specific EIIABC component.
    
 0.907
xylA_1
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.890
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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