STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL44190.1IncA protein. (86 aa)    
Predicted Functional Partners:
KJL35241.1
Hypothetical protein.
  
     0.558
KJL37295.1
Hypothetical protein.
  
     0.554
accA1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
       0.528
mmgC_1
Acyl-CoA dehydrogenase.
       0.528
paaZ
Bifunctional protein PaaZ.
       0.528
citE
Citrate lyase subunit beta-like protein; Belongs to the HpcH/HpaI aldolase family.
       0.528
KJL39431.1
Hypothetical protein.
  
     0.495
KJL36541.1
Hypothetical protein.
  
     0.477
KJL45885.1
Transposase.
  
     0.445
KJL36548.1
Hypothetical protein.
  
     0.434
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.