STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL43060.1Putative nitroreductase. (146 aa)    
Predicted Functional Partners:
cdr_1
Coenzyme A disulfide reductase.
  
 0.914
moeZ_1
Putative adenylyltransferase/sulfurtransferase MoeZ.
  
 0.885
rutA_2
Pyrimidine monooxygenase RutA.
  
  
 0.807
rutA_1
Pyrimidine monooxygenase RutA.
  
  
 0.782
fgd1_3
F420-dependent glucose-6-phosphate dehydrogenase.
  
  
 0.781
fgd1_1
F420-dependent glucose-6-phosphate dehydrogenase.
  
  
 0.779
fbiB
Coenzyme F420:L-glutamate ligase.
  
   
 0.757
cofC
2-phospho-L-lactate guanylyltransferase.
 
   
 0.743
snaA
Pristinamycin IIA synthase subunit A.
  
  
 0.740
degU_1
Transcriptional regulatory protein DegU.
    
 
 0.737
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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