Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL42770.1 | KJL42772.1 | RR49_00240 | RR49_00242 | Hypothetical protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.588 |
KJL42770.1 | KJL42773.1 | RR49_00240 | RR49_00243 | Hypothetical protein. | Hypothetical protein. | 0.588 |
KJL42770.1 | KJL42774.1 | RR49_00240 | RR49_00244 | Hypothetical protein. | Putative DMT superfamily transporter inner membrane protein. | 0.588 |
KJL42770.1 | csoR_1 | RR49_00240 | RR49_00239 | Hypothetical protein. | Copper-sensing transcriptional repressor CsoR. | 0.557 |
KJL42770.1 | ubiB_1 | RR49_00240 | RR49_00241 | Hypothetical protein. | Putative protein kinase UbiB. | 0.705 |
KJL42772.1 | KJL42770.1 | RR49_00242 | RR49_00240 | Glyceraldehyde-3-phosphate dehydrogenase. | Hypothetical protein. | 0.588 |
KJL42772.1 | KJL42773.1 | RR49_00242 | RR49_00243 | Glyceraldehyde-3-phosphate dehydrogenase. | Hypothetical protein. | 0.773 |
KJL42772.1 | KJL42774.1 | RR49_00242 | RR49_00244 | Glyceraldehyde-3-phosphate dehydrogenase. | Putative DMT superfamily transporter inner membrane protein. | 0.804 |
KJL42772.1 | csoR_1 | RR49_00242 | RR49_00239 | Glyceraldehyde-3-phosphate dehydrogenase. | Copper-sensing transcriptional repressor CsoR. | 0.435 |
KJL42772.1 | ubiB_1 | RR49_00242 | RR49_00241 | Glyceraldehyde-3-phosphate dehydrogenase. | Putative protein kinase UbiB. | 0.675 |
KJL42773.1 | KJL42770.1 | RR49_00243 | RR49_00240 | Hypothetical protein. | Hypothetical protein. | 0.588 |
KJL42773.1 | KJL42772.1 | RR49_00243 | RR49_00242 | Hypothetical protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.773 |
KJL42773.1 | KJL42774.1 | RR49_00243 | RR49_00244 | Hypothetical protein. | Putative DMT superfamily transporter inner membrane protein. | 0.773 |
KJL42773.1 | csoR_1 | RR49_00243 | RR49_00239 | Hypothetical protein. | Copper-sensing transcriptional repressor CsoR. | 0.435 |
KJL42773.1 | ubiB_1 | RR49_00243 | RR49_00241 | Hypothetical protein. | Putative protein kinase UbiB. | 0.642 |
KJL42774.1 | KJL42770.1 | RR49_00244 | RR49_00240 | Putative DMT superfamily transporter inner membrane protein. | Hypothetical protein. | 0.588 |
KJL42774.1 | KJL42772.1 | RR49_00244 | RR49_00242 | Putative DMT superfamily transporter inner membrane protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.804 |
KJL42774.1 | KJL42773.1 | RR49_00244 | RR49_00243 | Putative DMT superfamily transporter inner membrane protein. | Hypothetical protein. | 0.773 |
KJL42774.1 | csoR_1 | RR49_00244 | RR49_00239 | Putative DMT superfamily transporter inner membrane protein. | Copper-sensing transcriptional repressor CsoR. | 0.435 |
KJL42774.1 | mhqR | RR49_00244 | RR49_00745 | Putative DMT superfamily transporter inner membrane protein. | HTH-type transcriptional regulator MhqR. | 0.483 |
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