STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL42132.1ABC-2 family transporter protein. (537 aa)    
Predicted Functional Partners:
drrA_2
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
  
 0.956
KJL42133.1
MarR family protein.
 
     0.903
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
  
 0.875
KJL42126.1
MarR family protein.
 
     0.723
ybhR
Inner membrane transport permease YbhR.
  
  
 0.669
pcaF_2
Beta-ketoadipyl-CoA thiolase.
       0.613
ybhF
Putative ABC transporter ATP-binding protein YbhF.
 
  
 0.530
pcaF_1
Beta-ketoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.419
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.