STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL40882.1Hypothetical protein. (101 aa)    
Predicted Functional Partners:
KJL40881.1
Hypothetical protein.
 
     0.955
KJL40883.1
Hypothetical protein.
 
     0.948
KJL40886.1
AAA-like domain protein.
 
     0.948
KJL40888.1
Hypothetical protein.
 
     0.948
KJL40885.1
Hypothetical protein.
 
     0.942
KJL40887.1
TraM recognition site of TraD and TraG.
 
     0.942
KJL40877.1
Hypothetical protein.
 
     0.862
KJL40884.1
Hypothetical protein.
 
    
0.822
KJL40890.1
Relaxase/mobilization nuclease domain protein.
  
     0.769
mepM_2
Murein DD-endopeptidase MepM.
 
     0.610
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.