STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL40059.1Bacterial type II secretion system protein F domain protein. (294 aa)    
Predicted Functional Partners:
KJL40058.1
Putative conjugal transfer protein.
  
  
 0.921
KJL40060.1
Hypothetical protein.
 
   
 0.860
KJL35435.1
Bacterial type II secretion system protein F domain protein.
 
  
 0.813
KJL40061.1
Hypothetical protein.
 
     0.740
KJL35689.1
Hypothetical protein.
  
    0.711
KJL35433.1
Hypothetical protein.
 
  
 0.684
KJL35437.1
Putative conjugal transfer protein.
  
  
 0.668
KJL35616.1
Hypothetical protein.
  
     0.632
KJL35615.1
Hypothetical protein.
  
     0.618
KJL36669.1
Hypothetical protein.
  
     0.558
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.