Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rhaM_1L-rhamnose mutarotase. (125 aa)    
Predicted Functional Partners:
xylA_2
Xylose isomerase.
 
  
  0.973
rhaB
Rhamnulokinase.
 
  
 0.885
tsaC1
4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2.
 
  
 0.881
lsrB
Autoinducer 2-binding protein LsrB precursor.
 
    0.865
rbsR
Ribose operon repressor.
 
     0.569
lacR
Lactose phosphotransferase system repressor.
       0.559
lsrC
Autoinducer 2 import system permease protein LsrC; Belongs to the binding-protein-dependent transport system permease family.
 
    0.552
lsrD_1
Autoinducer 2 import system permease protein LsrD; Belongs to the binding-protein-dependent transport system permease family.
 
     0.542
rbsA_1
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
    0.493
mdlB
(S)-mandelate dehydrogenase.
       0.492
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
Server load: low (16%) [HD]