STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
limB_2Limonene 1,2-monooxygenase. (344 aa)    
Predicted Functional Partners:
KJL39171.1
PAP2 superfamily protein.
       0.686
ssuE
FMN reductase (NADPH).
  
  0.659
papA3
Acyltransferase papA3.
 
 
  0.636
KJL39172.1
Putative acetyltransferase.
       0.497
KJL39173.1
NmrA-like family protein.
       0.497
luxA
Alkanal monooxygenase alpha chain.
  
     0.453
ssuC_1
Putative aliphatic sulfonates transport permease protein SsuC.
   
 
  0.451
KJL36734.1
Putative thiamine biosynthesis protein.
   
 
  0.440
KJL36573.1
NMT1/THI5 like protein.
   
 
  0.440
ssuC_4
Putative aliphatic sulfonates transport permease protein SsuC.
  
 
  0.424
Your Current Organism:
Microbacterium ginsengisoli
NCBI taxonomy Id: 400772
Other names: DSM 18659, JCM 15304, KCTC 19189, M. ginsengisoli, Microbacterium ginsengisoli Park et al. 2008, strain Gsoil 259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.